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On “Model Organisms”

LessWrong · Jun 18, 2026, 6:42 PM

This post was written while working for Arcadia Impact's Alignment Team (and grew out of an internal talk I gave) but is my own opinion and not theirs. I am grateful for feedback from Daniel Tan and the rest of the team.This post was originally going to be more heavily about “model organisms” in AI safety research. But Francis Rhys Ward already wrote an excellent taxonomy which mostly covers that. So this is mostly about the history of the terms we're using, and about biology.[1]TL;DR what are you studying? Are you studying a production language model in order to infer things about how language models behave in general? Are you studying a model with a specific intervention to prove that intervention’s effects? Or are you studying a model with a specific property, in order to make inferences about that property in other language models?Model Organisms in BiologyWhen a biologist uses the term model organism, they’re typically referring to a certain species, like Mus musculus, the lab mouse, or Arabidopsis thaliana, a type of pavement weed used in plant biology.If you want to run an experiment today, you’ll use mice instead of gerbils, for a few reasons. Some are boringly practical: mice have been chosen precisely because they’re easy to keep in captivity and easy to work with; mice are readily available, as are their cages, food, and bedding, and as are researchers who are trained to work with mice. But also, mice are well-studied. If you observe a behavioural change, you can compare it to existing literature results. If you note that your mice are producing an excess of a particular protein, it’s a good bet that someone else has already figured out what that protein does, what gene is responsible for producing it, and quite possibly what upstream regulators might cause it to be produced in higher quantities. Convenience and understanding feed back into one another to make mice a good research subject.This has downsides too: while we know a lot about mice, we know a l

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